ERR1146429_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1146429_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3888255
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	12030	0.3093932882488417	No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC	9798	0.25198964574082716	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT	7859	0.2021215172358809	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	6718	0.17277673403621935	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	5853	0.15053025071658108	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	5765	0.148267024667878	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	5167	0.1328873749278275	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC	4546	0.1169162001977751	No Hit
GTGTAGGACTCGTCGCATTGGATGACGATGCCTAGTACTGTGCGCCAATT	3991	0.10264244500424997	No Hit
GTATACGGGCGTCGGCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGG	3914	0.10066212221163477	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTACTAG	3155	34.23525	1
GTATCAA	7340	33.800808	1
CAACGCA	7025	32.633183	5
GGTATCA	4725	31.544424	1
GCATCGT	3245	31.10409	8
ATCAACG	7395	30.815025	3
GGGCACC	3660	29.281565	94
TAGGCAT	3990	28.963306	5
TAGTACT	4125	28.01614	4
AACGCAG	8540	27.867197	6
CTAGGCA	4485	27.443277	4
TATCAAC	9055	27.139055	2
CTGTGCG	4460	26.421694	9
GTACATG	14830	25.793903	1
ACGCAGA	8875	25.495691	7
TACATGG	14880	25.45151	2
TCAACGC	9255	25.329185	4
CTAGTAC	4815	25.273329	3
CGCAGAG	8990	24.960999	8
ACATGGG	14885	24.46312	3