FastQCFastQC Report
Fri 27 May 2016
ERR765573_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR765573_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13459752
Sequences flagged as poor quality0
Sequence length1
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
C366126627.2015858836032No Hit
T334821324.87574065257666No Hit
A332601624.710826767090506No Hit
G312425723.211846696729626No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)