Basic Statistics
Measure | Value |
---|---|
Filename | ERR765429_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17374404 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA | 25384 | 0.14609997557326282 | No Hit |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 24732 | 0.14234732886376994 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 21164 | 0.12181137263758803 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 65485 | 0.0 | 25.234869 | 1 |
GTACTAG | 6995 | 0.0 | 21.226082 | 1 |
CAACGCA | 73500 | 0.0 | 21.19034 | 5 |
ATCAACG | 74425 | 0.0 | 20.902925 | 3 |
AACGCAG | 76505 | 0.0 | 20.638906 | 6 |
GTACATG | 109665 | 0.0 | 19.721659 | 1 |
TACATGG | 106785 | 0.0 | 19.668285 | 2 |
TCAACGC | 79875 | 0.0 | 19.56402 | 4 |
CATGGGG | 43660 | 0.0 | 19.52092 | 4 |
TATCAAC | 85530 | 0.0 | 19.414103 | 2 |
AATACGG | 3260 | 0.0 | 19.312075 | 5 |
TATTCGC | 1050 | 0.0 | 19.239206 | 9 |
ACGCAGA | 80745 | 0.0 | 19.083858 | 7 |
CGCAGAG | 81080 | 0.0 | 18.860153 | 8 |
CTATTGA | 8180 | 0.0 | 18.780294 | 9 |
ACATGGG | 104730 | 0.0 | 18.636406 | 3 |
GTACAAG | 6985 | 0.0 | 18.633045 | 1 |
GTGATCG | 4225 | 0.0 | 18.4582 | 8 |
TAGGCAT | 9280 | 0.0 | 17.973064 | 5 |
GCAGAGT | 83115 | 0.0 | 17.929234 | 9 |