FastQCFastQC Report
Fri 27 May 2016
ERR765400_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR765400_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11712924
Sequences flagged as poor quality0
Sequence length1
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
C310353326.496654464760468No Hit
T297820225.426631300604356No Hit
A289580024.7231178141342No Hit
G273319123.33483082448072No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)