FastQCFastQC Report
Fri 27 May 2016
ERR765330_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR765330_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15020530
Sequences flagged as poor quality0
Sequence length1
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
C404139226.905788277777148No Hit
A381012925.366142206699767No Hit
G364286624.252579636004853No Hit
T352614323.475489879518232No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)