Basic Statistics
Measure | Value |
---|---|
Filename | ERR523197_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6481562 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 26343 | 0.4064298081234122 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 21412 | 0.33035246750706077 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 12929 | 0.1994735219689328 | No Hit |
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 10814 | 0.16684249876804386 | No Hit |
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT | 7751 | 0.11958537155087 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TACCTGG | 11085 | 0.0 | 53.53176 | 2 |
GTACCTG | 12465 | 0.0 | 48.22188 | 1 |
ACCTGGG | 12575 | 0.0 | 46.36693 | 3 |
CCTGGGG | 11020 | 0.0 | 35.411747 | 4 |
TATAACG | 735 | 0.0 | 35.18546 | 2 |
ATAACGC | 880 | 0.0 | 30.99131 | 3 |
TAACGCA | 870 | 0.0 | 30.803957 | 4 |
GTACCCG | 1145 | 0.0 | 25.878592 | 1 |
CTGGGGG | 7240 | 0.0 | 24.610357 | 5 |
GTATCAA | 37255 | 0.0 | 23.191572 | 1 |
CATGGGG | 15915 | 0.0 | 22.59986 | 4 |
GTACATG | 29135 | 0.0 | 22.00323 | 1 |
GGTATCA | 27975 | 0.0 | 21.873224 | 1 |
TACCCGG | 1360 | 0.0 | 21.435846 | 2 |
TACATGG | 29905 | 0.0 | 21.084963 | 2 |
TACCGGG | 845 | 0.0 | 20.588888 | 2 |
ACATGGG | 29720 | 0.0 | 20.536219 | 3 |
GAGTACT | 22200 | 0.0 | 20.500948 | 12-13 |
TCAACGC | 41530 | 0.0 | 20.479885 | 4 |
ATGGGGG | 9635 | 0.0 | 20.444643 | 5 |