Basic Statistics
Measure | Value |
---|---|
Filename | ERR523186_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8934922 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT | 62265 | 0.69687233979211 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 25314 | 0.2833152880349711 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 20163 | 0.22566509254361705 | No Hit |
GTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT | 18306 | 0.20488147518243582 | No Hit |
TATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATC | 14408 | 0.16125490519111413 | No Hit |
ACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGC | 13529 | 0.1514171024660316 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 11410 | 0.12770117075448448 | No Hit |
GGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTA | 10311 | 0.11540111933825499 | No Hit |
GTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAA | 8993 | 0.10065001127038378 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACATG | 33285 | 0.0 | 26.749933 | 1 |
TACATGG | 33580 | 0.0 | 25.97893 | 2 |
ACATGGG | 34225 | 0.0 | 24.771034 | 3 |
CATGGGG | 22205 | 0.0 | 22.370478 | 4 |
GAGTACT | 24765 | 0.0 | 20.92822 | 12-13 |
AGAGTAC | 40180 | 0.0 | 19.33988 | 10-11 |
GTACTTT | 26640 | 0.0 | 19.328623 | 14-15 |
ATGGGGG | 13150 | 0.0 | 18.619078 | 5 |
AGTACTT | 26770 | 0.0 | 18.043695 | 12-13 |
CATGGGA | 12540 | 0.0 | 17.126543 | 4 |
ACTTTTT | 31740 | 0.0 | 16.294378 | 16-17 |
GAGTACA | 25230 | 0.0 | 16.107092 | 1 |
AGTACAT | 24850 | 0.0 | 15.245183 | 2 |
TACTTTT | 30970 | 0.0 | 15.207201 | 14-15 |
TACCTGG | 6625 | 0.0 | 14.686167 | 2 |
GTATTAG | 2670 | 0.0 | 14.092867 | 1 |
GTGTAGC | 4855 | 0.0 | 14.047511 | 1 |
ATGGGGA | 9565 | 0.0 | 13.904253 | 5 |
GTATAGG | 2520 | 0.0 | 13.625201 | 1 |
TATACTG | 3710 | 0.0 | 13.426974 | 5 |