Basic Statistics
Measure | Value |
---|---|
Filename | ERR523184_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8133495 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 28438 | 0.3496405911603806 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 23616 | 0.29035488433938916 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 13115 | 0.1612467948895278 | No Hit |
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGT | 12790 | 0.15725097267533822 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TACCTGG | 11505 | 0.0 | 43.537453 | 2 |
ACCTGGG | 12330 | 0.0 | 38.945507 | 3 |
GTACCTG | 13765 | 0.0 | 37.004078 | 1 |
TATAACG | 880 | 0.0 | 36.877922 | 2 |
TAACGCA | 1060 | 0.0 | 31.501879 | 4 |
ATAACGC | 1145 | 0.0 | 29.574793 | 3 |
CCTGGGG | 12125 | 0.0 | 26.841595 | 4 |
GTATCAA | 42565 | 0.0 | 24.143274 | 1 |
GTACATG | 29755 | 0.0 | 23.26726 | 1 |
GGTATCA | 31655 | 0.0 | 22.55417 | 1 |
TACATGG | 30385 | 0.0 | 22.30513 | 2 |
GTATAAC | 2280 | 0.0 | 22.278517 | 1 |
ACATGGG | 30170 | 0.0 | 21.512877 | 3 |
TCAACGC | 48220 | 0.0 | 21.086887 | 4 |
CATGGGG | 18965 | 0.0 | 20.95501 | 4 |
CAACGCA | 48535 | 0.0 | 20.930006 | 5 |
ATCAACG | 48915 | 0.0 | 20.730099 | 3 |
TATCAAC | 49620 | 0.0 | 20.587477 | 2 |
GAGTACT | 26025 | 0.0 | 20.533854 | 12-13 |
AACGCAG | 50040 | 0.0 | 20.42342 | 6 |