Basic Statistics
Measure | Value |
---|---|
Filename | ERR522988_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6791120 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 11165 | 0.16440587119650368 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 9493 | 0.13978548457397308 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 8370 | 0.0 | 47.21898 | 1 |
GTATCAA | 15005 | 0.0 | 39.97946 | 1 |
TCAACGC | 17675 | 0.0 | 33.28886 | 4 |
CAACGCA | 18040 | 0.0 | 32.56323 | 5 |
ATCAACG | 18255 | 0.0 | 32.207832 | 3 |
TATCAAC | 19000 | 0.0 | 31.316845 | 2 |
AACGCAG | 19090 | 0.0 | 30.918282 | 6 |
ACGCAGA | 22325 | 0.0 | 26.458538 | 7 |
GTACATG | 23025 | 0.0 | 25.624811 | 1 |
CGCAGAG | 23350 | 0.0 | 25.281425 | 8 |
TACATGG | 23740 | 0.0 | 24.291307 | 2 |
ACATGGG | 24135 | 0.0 | 23.212128 | 3 |
GCAGAGT | 27220 | 0.0 | 21.669773 | 9 |
CATGGGG | 17200 | 0.0 | 21.667 | 4 |
GTGGTAT | 5140 | 0.0 | 19.314438 | 1 |
GAGTACT | 12985 | 0.0 | 19.184278 | 12-13 |
TACCTGG | 5565 | 0.0 | 19.017721 | 2 |
ATGGGGG | 10210 | 0.0 | 18.871748 | 5 |
AGAGTAC | 23820 | 0.0 | 18.834137 | 10-11 |
CAGAGTA | 25515 | 0.0 | 18.817173 | 10-11 |