Basic Statistics
Measure | Value |
---|---|
Filename | ERR522901_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5765135 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 10297 | 0.17860813320069696 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 8732 | 0.1514621947274435 | No Hit |
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA | 6783 | 0.11765552758088059 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TACCTGG | 12220 | 0.0 | 60.459396 | 2 |
GTACCTG | 14095 | 0.0 | 53.027924 | 1 |
ACCTGGG | 13895 | 0.0 | 52.629677 | 3 |
CCTGGGG | 12095 | 0.0 | 41.482456 | 4 |
CTGGGGG | 7025 | 0.0 | 32.19228 | 5 |
GTACCCG | 1105 | 0.0 | 30.648981 | 1 |
TGGGGGG | 9985 | 0.0 | 27.766352 | 6 |
CATGGGG | 14710 | 0.0 | 26.180452 | 4 |
ATGGGGG | 9055 | 0.0 | 24.87139 | 5 |
GTACATG | 26695 | 0.0 | 24.38664 | 1 |
TATCACG | 580 | 0.0 | 23.514124 | 2 |
TACATGG | 26950 | 0.0 | 23.453049 | 2 |
ACATGGG | 27565 | 0.0 | 22.07675 | 3 |
TACCCGG | 1455 | 0.0 | 21.65562 | 2 |
TATAACG | 675 | 0.0 | 21.598162 | 2 |
GTATCAA | 24395 | 0.0 | 19.937263 | 1 |
ATAACGC | 750 | 0.0 | 19.438345 | 3 |
GTACCGG | 880 | 0.0 | 19.242683 | 1 |
GTACACG | 1235 | 0.0 | 19.043592 | 1 |
TACCGGG | 865 | 0.0 | 19.028774 | 2 |