Basic Statistics
Measure | Value |
---|---|
Filename | ERR522895_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8837200 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 27226 | 0.30808400850948264 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 22049 | 0.24950210473905762 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 12858 | 0.14549857420902548 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 18385 | 0.0 | 38.92421 | 1 |
GTATCAA | 29545 | 0.0 | 35.400524 | 1 |
TCAACGC | 34835 | 0.0 | 29.40997 | 4 |
CAACGCA | 35360 | 0.0 | 28.98627 | 5 |
ATCAACG | 35615 | 0.0 | 28.74208 | 3 |
TATCAAC | 36450 | 0.0 | 28.17743 | 2 |
AACGCAG | 36650 | 0.0 | 28.049412 | 6 |
GTACATG | 29820 | 0.0 | 26.427824 | 1 |
TACATGG | 30080 | 0.0 | 25.549795 | 2 |
ACGCAGA | 41375 | 0.0 | 24.834831 | 7 |
ACATGGG | 31170 | 0.0 | 23.899332 | 3 |
CGCAGAG | 43015 | 0.0 | 23.800453 | 8 |
CATGGGG | 22390 | 0.0 | 22.248749 | 4 |
GCAGAGT | 46680 | 0.0 | 21.558296 | 9 |
GAGTACT | 25035 | 0.0 | 21.084932 | 12-13 |
ATGGGGG | 13170 | 0.0 | 20.232344 | 5 |
AGAGTAC | 38085 | 0.0 | 19.921732 | 10-11 |
GTACTTT | 27295 | 0.0 | 19.149555 | 14-15 |
CAGAGTA | 45505 | 0.0 | 18.71231 | 10-11 |
AGTACTT | 26790 | 0.0 | 17.897278 | 12-13 |