Basic Statistics
Measure | Value |
---|---|
Filename | ERR522846_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9592954 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 21950 | 0.22881377310888804 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 17117 | 0.17843304575420668 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 10107 | 0.10535857880690348 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 14430 | 0.0 | 46.30318 | 1 |
GTATCAA | 24925 | 0.0 | 38.529785 | 1 |
TCAACGC | 29225 | 0.0 | 32.208305 | 4 |
CAACGCA | 29470 | 0.0 | 31.87609 | 5 |
ATCAACG | 30145 | 0.0 | 31.226969 | 3 |
AACGCAG | 30770 | 0.0 | 30.752014 | 6 |
TATCAAC | 31600 | 0.0 | 29.942406 | 2 |
GTACATG | 33215 | 0.0 | 27.369173 | 1 |
ACGCAGA | 35120 | 0.0 | 26.822638 | 7 |
TACATGG | 34095 | 0.0 | 26.262392 | 2 |
CGCAGAG | 36345 | 0.0 | 25.89165 | 8 |
ACATGGG | 34470 | 0.0 | 25.181973 | 3 |
CATGGGG | 22815 | 0.0 | 22.595793 | 4 |
GCAGAGT | 41175 | 0.0 | 22.522734 | 9 |
GAGTACT | 21905 | 0.0 | 20.472982 | 12-13 |
ATGGGGG | 13250 | 0.0 | 19.54196 | 5 |
AGAGTAC | 36265 | 0.0 | 19.53525 | 10-11 |
CAGAGTA | 40015 | 0.0 | 19.377512 | 10-11 |
GTACTTT | 23315 | 0.0 | 18.952234 | 14-15 |
GAGTACA | 25685 | 0.0 | 17.89797 | 1 |