ERR1211609_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1211609_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2398295
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15788	0.658301001336366	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13216	0.5510581475589951	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12181	0.5079024890599363	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9578	0.39936705034201386	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	6647	0.2771552290272881	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6197	0.2583918992450887	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	2782	0.11599907434239741	No Hit
GTACCTGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	2627	0.10953614963963984	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2432	0.10140537340068674	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACCTGG	5090	66.93783	2
GTACCTG	5315	64.805954	1
ACCTGGG	5370	60.464714	3
TAACGCA	565	57.38506	4
TATAACG	570	54.49039	2
GTACCCG	550	49.757736	1
ATAACGC	705	45.322933	3
CCTGGGG	3430	44.112324	4
TACCCGG	620	40.98764	2
GTATAAC	940	40.156647	1
TATCACG	320	38.236156	2
CTGGGGG	2210	32.31501	5
CCTGGGA	4025	30.470026	4
TGGGATG	2870	28.48111	6
ATCACGC	460	27.580627	3
TCACGCA	505	26.98391	4
CATGGGG	6315	26.712793	4
ATGGGGG	3835	26.340624	5
GGTATCA	13820	24.68457	1
ATAGCCC	1050	24.163364	5