ERR1211609_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1211609_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2398295
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17583	0.7331458390231393	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14866	0.6198570234270596	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12660	0.5278750112058775	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11146	0.4647468305608776	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	8662	0.3611732501631367	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6387	0.26631419404201734	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG	3733	0.15565224461544555	No Hit
GTACCTGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	3429	0.1429765729403597	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2755	0.11487327455546545	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2410	0.10048805505577922	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACCTGG	4520	66.697464	2
TATAACG	630	64.94839	2
TAACGCA	655	63.848232	4
GTACCTG	4895	62.134247	1
ACCTGGG	4895	59.90447	3
GTACCCG	520	56.222782	1
ATAACGC	890	46.464367	3
GTATAAC	1020	45.305393	1
CCTGGGG	3070	44.38741	4
TACCCGG	700	38.969032	2
TATCACG	275	37.625275	2
CTGGGGG	1860	29.810497	5
CCTGGGA	3835	29.039103	4
TACCGTA	260	28.917778	7
ACCCGGG	925	28.449434	3
CATGGGG	6370	27.662537	4
GTACCGT	310	27.285322	6
ATGGGGG	3665	27.18079	5
ACCGTAT	280	26.852222	8
ACAACGC	335	26.65239	3