Basic Statistics
Measure | Value |
---|---|
Filename | ERR1211547_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7628800 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 27654 | 0.3624947567114094 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 25716 | 0.33709102348993286 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 16322 | 0.2139523909395973 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 14080 | 0.0 | 50.030483 | 1 |
GTATCAA | 23970 | 0.0 | 36.54857 | 1 |
TCAACGC | 29250 | 0.0 | 29.318241 | 4 |
ATCAACG | 29315 | 0.0 | 29.189117 | 3 |
CAACGCA | 29725 | 0.0 | 28.78613 | 5 |
AACGCAG | 30850 | 0.0 | 27.796772 | 6 |
TATCAAC | 31255 | 0.0 | 27.532505 | 2 |
ACGCAGA | 35270 | 0.0 | 24.220053 | 7 |
CGCAGAG | 35710 | 0.0 | 23.89531 | 8 |
GTACATG | 25190 | 0.0 | 22.140224 | 1 |
TACATGG | 25675 | 0.0 | 21.373446 | 2 |
GCAGAGT | 39845 | 0.0 | 21.03802 | 9 |
ACATGGG | 25315 | 0.0 | 20.900726 | 3 |
GAGTACT | 25095 | 0.0 | 20.559261 | 12-13 |
CATGGGG | 12730 | 0.0 | 19.563583 | 4 |
AGAGTAC | 37190 | 0.0 | 19.299307 | 10-11 |
CAGAGTA | 39275 | 0.0 | 18.974646 | 10-11 |
AGTACTT | 26695 | 0.0 | 18.948572 | 12-13 |
GTACTTT | 27160 | 0.0 | 18.824657 | 14-15 |
GTACCTG | 5890 | 0.0 | 18.761955 | 1 |