ERR1211350_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1211350_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4887669
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30108	0.6159991603359393	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22591	0.4622039667579781	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16238	0.3322238064811672	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15280	0.3126234612041036	No Hit
CTATTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATG	7310	0.14956004590327207	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7255	0.14843476512014214	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7116	0.1455908736864137	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACT	6613	0.13529966943342522	No Hit
GTATAATTCTATTCATCGTCTCGGAAGTATTTTTCTTTGCAGGATTCTTC	5257	0.10755638321662125	No Hit
CTATAAGGCTATGATGAGCTCATGTAATTGAAACACCTGATGCTAGAAGT	5110	0.10454881457807393	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4967	0.10162308454193605	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACCTGG	6370	70.15082	2
ACCTGGG	6835	64.01498	3
GTACCTG	8330	53.75933	1
GGTATCA	12135	47.83407	1
CCTGGGG	4320	45.691097	4
TATCACG	400	41.158222	2
GTATCAA	22490	39.551594	1
TAACGCA	650	36.874218	4
ATCAACG	27015	32.149	3
CAACGCA	27280	31.835073	5
GTACACG	645	31.35961	1
TCAACGC	27790	31.319761	4
AACGCAG	28895	30.462967	6
TATCAAC	29220	29.781055	2
GTACATG	26540	28.766003	1
CTGGGGG	3575	28.262505	5
TATAACG	850	28.222782	2
ACGCAGA	31465	27.691315	7
CGCAGAG	31885	27.324598	8
CATGGGT	2840	27.138857	4