ERR1211332_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1211332_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5761187
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30579	0.5307760362578059	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24135	0.41892408630374267	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15549	0.2698922982364572	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11491	0.19945542472410635	No Hit
CTATTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATG	10507	0.1823756111370799	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACT	9262	0.16076548114129952	No Hit
CTATAAGGCTATGATGAGCTCATGTAATTGAAACACCTGATGCTAGAAGT	6906	0.11987113072358178	No Hit
GTATAATTCTATTCATCGTCTCGGAAGTATTTTTCTTTGCAGGATTCTTC	6260	0.10865816367356242	No Hit
CATTTACACCTACTACCCAACTATCCATAAATCTAAGTATAGCCATTCCA	6177	0.10721748834051038	No Hit
ATCTAGGAGGCTGCTGACCTCCAACAGGAATTTCACCACTTAACCCTCTA	5963	0.1035029760360148	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5824	0.10109027879150599	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACCTGG	7540	69.685524	2
ACCTGGG	7665	67.02655	3
CCTGGGG	4295	53.418365	4
GTACCTG	10315	51.360588	1
TATCACG	385	47.522552	2
TAACGCA	785	46.61974	4
GTACCCG	365	42.425438	1
GGTATCA	16465	41.06837	1
GTACACG	610	39.232464	1
GTATCAA	28850	36.808147	1
TATAACG	1050	33.50949	2
CTGGGGG	3975	32.452072	5
GACATAT	1780	30.05316	1
ATCAACG	34665	29.993246	3
TCACGCA	600	29.715105	4
CAACGCA	35395	29.566816	5
TCAACGC	35775	29.15444	4
AACGCAG	37155	28.443762	6
CATGGGT	3920	28.246902	4
GTACATG	36925	28.136	1