ERR1211276_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1211276_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8499120
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43381	0.5104175491109667	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35455	0.4171608354747315	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22174	0.2608975988102298	No Hit
CTATTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATG	13900	0.16354634362145729	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACT	12522	0.1473329003473301	No Hit
ATCTAGGAGGCTGCTGACCTCCAACAGGAATTTCACCACTTAACCCTCTA	10983	0.12922514330895432	No Hit
CTATAAGGCTATGATGAGCTCATGTAATTGAAACACCTGATGCTAGAAGT	10147	0.11938883084366382	No Hit
GAATAACCCTGGTCGGTTTGATGTTACTGTTGCTTGATTTAGTCGGCCTG	8873	0.10439904366569715	No Hit
CATTTACACCTACTACCCAACTATCCATAAATCTAAGTATAGCCATTCCA	8767	0.10315185572153353	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	19640	55.987946	1
GTATCAA	39035	41.21453	1
ACCTGGG	2225	37.11695	3
TACCTGG	2280	36.42439	2
CAACGCA	47990	32.52234	5
TACCCCG	320	32.251682	5
ATCAACG	48435	32.241383	3
TATCACG	225	31.2797	2
TAGGCAT	5535	31.104853	5
CATGGGT	4660	30.711857	4
AACGCAG	51640	30.55046	6
TCAACGC	51805	30.261953	4
TCTCTGC	3900	29.83058	8
TATCAAC	53350	29.646824	2
GTGGTAC	1920	28.843271	1
GGTACTC	1915	27.933521	3
ATGGGTA	3665	27.903727	5
GTACTAG	4810	27.61246	1
AGGGGTC	2975	27.121967	5
TCACGCA	260	27.071362	4