Basic Statistics
Measure | Value |
---|---|
Filename | ERR489020_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22470189 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAA | 68979 | 0.30698006144941636 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 26422 | 0.11758690592233113 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACCTG | 23980 | 0.0 | 23.343538 | 1 |
GTACCCG | 2030 | 0.0 | 22.837368 | 1 |
TACCTGG | 24060 | 0.0 | 22.828222 | 2 |
ACCTGGG | 25035 | 0.0 | 20.809181 | 3 |
TACCCGG | 2275 | 0.0 | 19.259586 | 2 |
TAGCCCT | 17850 | 0.0 | 18.535078 | 4 |
GTGTAGC | 12590 | 0.0 | 18.466343 | 1 |
GAGTACT | 78900 | 0.0 | 18.45589 | 12 |
GTAGGAC | 15160 | 0.0 | 18.342625 | 3 |
AGTACTT | 80190 | 0.0 | 18.12888 | 13 |
CGACTTG | 8725 | 0.0 | 17.399897 | 64 |
GACGACT | 8930 | 0.0 | 17.386833 | 62 |
TTGACGA | 8780 | 0.0 | 17.367254 | 60 |
GTACTTT | 83555 | 0.0 | 17.283169 | 14 |
GTCCTAC | 11680 | 0.0 | 17.179972 | 1 |
GTACATG | 106900 | 0.0 | 17.117218 | 1 |
GTATAGC | 11125 | 0.0 | 17.10409 | 1 |
TACATGG | 106470 | 0.0 | 16.830591 | 2 |
CTTGACG | 8940 | 0.0 | 16.709091 | 59 |
ACGACTT | 9310 | 0.0 | 16.640106 | 63 |