ERR488987_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	ERR488987_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9177922
Sequences flagged as poor quality	0
Sequence length	75
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAA	153226	1.6695064525499343	No Hit
TATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAA	30615	0.3335722399907082	No Hit
ACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAG	27212	0.29649413015277315	No Hit
GTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTA	23352	0.2544366796754211	No Hit
GGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATC	21977	0.23945507490693427	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15067	0.16416570112493875	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12481	0.13598938844762465	No Hit
CAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGG	10966	0.1194823839208919	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACCTGG	20650	44.87367	2
GTACCTG	20825	44.810337	1
ACCTGGG	22210	40.949333	3
CCTGGGG	16955	34.826954	4
TATAACG	975	32.613544	2
ATAACGC	1075	29.251116	3
GAGTACG	2790	28.608564	1
TACCCGG	1935	28.400824	2
GTACCCG	2055	27.526321	1
TAACGCA	1200	27.353544	4
TATCACG	880	25.529686	2
TACGCAG	2915	25.247145	4
CTGGGGG	9240	25.237322	5
ACGCAGT	3040	24.432972	5
GTACGCA	3050	24.018482	3
AGTACGC	3255	22.829807	2
TACACGG	1560	21.934381	2
GTATAAC	1905	20.767406	1
GTACCGG	1375	20.695866	1
GTACACG	1895	20.693865	1