DRR025024_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	DRR025024_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3404180
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24660	0.7244035274280444	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19887	0.5841935502823	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15057	0.44230916109018914	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6155	0.18080712535764853	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6147	0.1805721201581585	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5199	0.1527240040185889	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4107	0.12064579428819862	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3964	0.1164450763473142	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	12760	48.98348	1
TACCTGG	3445	44.620007	2
TATAACG	525	40.292507	2
GTATCAA	22690	40.086422	1
ACCTGGG	4265	34.939068	3
TACAACG	985	33.883884	2
GTACCTG	4730	32.513367	1
ACAACGC	1070	32.070827	3
ATAACGC	690	32.01989	3
ATCAACG	29405	30.613903	3
TCAACGC	29795	30.160091	4
TATCAAC	30275	29.796272	2
CAACGCA	30890	29.151823	5
TAACGCA	710	29.126108	4
AACGCAG	32140	28.17807	6
GTATAAC	1035	27.263792	1
GTACAAC	1460	25.125635	1
ACGCAGA	35855	25.100828	7
CGCAGAG	35870	25.011353	8
GTGGTAT	5965	24.599113	1