DRR024981_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	DRR024981_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3351329
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23932	0.7141047626180539	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19817	0.5913176533846722	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14721	0.4392585747325911	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5945	0.17739231212453327	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5842	0.17431890453011328	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5223	0.15584862005490954	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4075	0.12159355288603416	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3849	0.11484995952352037	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	12150	49.67223	1
TACCTGG	3755	47.698647	2
TATAACG	485	39.740482	2
GTATCAA	21390	39.716434	1
ACCTGGG	4690	37.486107	3
TACAACG	1025	36.23216	2
GTACCTG	5045	35.99063	1
ACAACGC	1115	34.57089	3
ATAACGC	625	33.84574	3
ATCAACG	27895	30.198349	3
GTACAAC	1475	29.977757	1
TCAACGC	28285	29.760906	4
TATCAAC	28585	29.536507	2
TAACGCA	710	29.127357	4
CAACGCA	29595	28.507088	5
AACGCAG	30685	27.585943	6
GTACATG	20415	26.2675	1
TACATGG	20370	25.270515	2
ACGCAGA	34480	24.28929	7
CGCAGAG	34520	24.151867	8