DRR024938_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	DRR024938_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3178986
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22210	0.6986504501749929	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18417	0.5793356749605062	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13047	0.4104138866921717	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5266	0.16565030484563317	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5174	0.16275630027939725	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4829	0.15190378315601263	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3583	0.11270889522633946	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3459	0.10880828037619543	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	12080	47.714096	1
TACCTGG	3590	44.009754	2
TATAACG	420	41.424427	2
GTATCAA	20315	38.285435	1
TACAACG	935	38.221355	2
GTACCGG	350	37.641556	1
ACAACGC	970	36.356895	3
ATAACGC	590	32.676018	3
GTACCTG	4890	32.42639	1
ACCTGGG	4640	32.32734	3
TAACGCA	600	30.555374	4
GTACAAC	1265	29.012262	1
ATCAACG	26690	28.945845	3
TCAACGC	27080	28.555613	4
TATCAAC	27340	28.189316	2
CAACGCA	28330	27.494776	5
AACGCAG	29440	26.617792	6
GTACATG	19455	24.958935	1
TACATGG	19205	24.386478	2
ACGCAGA	33240	23.36161	7