DRR024895_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	DRR024895_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3346354
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23650	0.7067393348103638	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19694	0.5885211188057211	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14512	0.4336660138168287	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5890	0.17601246012824706	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5717	0.17084265442329172	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5366	0.16035362666352693	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3935	0.11759066733525504	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3812	0.11391502512884172	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	12280	49.86609	1
TATAACG	445	47.53833	2
TACCTGG	3640	43.264816	2
GTATCAA	21485	38.877674	1
ACCTGGG	4370	35.176914	3
GTACCTG	4760	34.08826	1
ATCAACG	27880	29.743855	3
TCAACGC	28215	29.403847	4
ATAACGC	640	29.381329	3
TATCAAC	28685	28.859974	2
ACAACGC	855	28.590954	3
CAACGCA	29230	28.447134	5
AACGCAG	30455	27.42637	6
TACAACG	825	27.351345	2
TAACGCA	665	26.859718	4
GTACATG	20270	25.639008	1
GTATAAC	925	25.422659	1
TACATGG	19935	25.232422	2
ACGCAGA	34400	24.140139	7
CGCAGAG	34260	24.074175	8