DRR024852_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	DRR024852_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3194318
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22757	0.7124212429695478	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19006	0.5949939861967406	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13421	0.4201522828973196	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5502	0.17224333957984148	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5445	0.17045892112181693	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4908	0.15364782091200688	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3685	0.1153610880319367	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3484	0.10906866504837652	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATAACG	385	50.076115	2
GGTATCA	12135	47.804516	1
TACCTGG	3375	43.74852	2
GTATCAA	20850	38.315746	1
TACAACG	745	36.608273	2
TAACGCA	570	35.45993	4
ACAACGC	870	35.1308	3
ACCTGGG	4070	35.00597	3
GTACCTG	4760	31.925756	1
ATAACGC	685	30.889854	3
ATCAACG	26765	29.637514	3
TCAACGC	26930	29.410868	4
TATCAAC	27480	29.021286	2
CAACGCA	27940	28.465462	5
AACGCAG	28935	27.64603	6
GTATAAC	925	27.46614	1
GTACAAC	1155	26.884848	1
GTACATG	19710	26.615454	1
TACATGG	19520	25.968475	2
ACATGGG	20025	24.397028	3