DRR024834_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	DRR024834_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6746924
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	55007	0.8152900492135379	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	41177	0.6103077491313078	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28017	0.41525590031842663	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	15528	0.23014932434395288	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11309	0.1676171244851728	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10908	0.16167367529262225	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8841	0.1310374920482282	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7996	0.11851326619360171	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	18300	66.41644	1
GTATCAA	38780	46.6968	1
ATCAACG	50330	35.739838	3
TCAACGC	50840	35.258842	4
TATCAAC	53075	33.997696	2
CAACGCA	52740	33.988613	5
TACAACG	1340	33.68224	2
AACGCAG	55335	32.513348	6
TACCTGG	4650	29.927696	2
CGCAGAG	61090	29.140524	8
ACGCAGA	61440	29.09712	7
GTACATG	39550	28.269423	1
TACATGG	38655	28.047112	2
GTGGTAT	5590	27.683327	1
TGGTATC	5320	27.39584	2
GCAGAGT	64565	27.135399	9
ACATGGG	40040	26.172821	3
ACAACGC	1750	26.05963	3
TATAACG	700	24.850677	2
ACCTGGG	5360	24.735394	3