DRR024806_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	DRR024806_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11579051
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	73882	0.6380661074901561	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	57857	0.4996696188660021	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	38111	0.32913750876475106	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	24064	0.20782359452428356	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18845	0.16275081610746855	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13458	0.11622714158526462	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12793	0.11048401116810005	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12765	0.11024219515053522	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12266	0.1059326882660764	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	29635	56.570602	1
GTATCAA	56455	43.605896	1
ATCAACG	72230	33.94277	3
TCAACGC	72810	33.64189	4
TATCAAC	73460	33.412853	2
CAACGCA	75885	32.353024	5
AACGCAG	78330	31.367031	6
TACCTGG	10265	28.451805	2
TACAACG	2690	27.623707	2
ACAACGC	2865	27.57794	3
ACGCAGA	88850	27.450108	7
CGCAGAG	89275	27.18341	8
GTGGTAT	12180	25.959833	1
TATAACG	1220	25.442589	2
GCAGAGT	94705	25.222622	9
TGGTATC	12830	24.009981	2
GTACATG	53090	23.831863	1
TACATGG	53500	23.03163	2
ACCTGGG	12665	22.280413	3
GTACCTG	13620	22.24788	1