Basic Statistics
Measure | Value |
---|---|
Filename | DRR028597_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1879728 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2285 | 0.0 | 72.582695 | 1 |
GTATCAA | 4010 | 0.0 | 54.78315 | 1 |
TCAACGC | 4485 | 0.0 | 47.797306 | 4 |
ATCAACG | 4505 | 0.0 | 47.58511 | 3 |
CAACGCA | 4805 | 0.0 | 44.76486 | 5 |
AACGCAG | 5120 | 0.0 | 42.01077 | 6 |
TATCAAC | 5255 | 0.0 | 41.34497 | 2 |
ACGCAGA | 5555 | 0.0 | 38.06913 | 7 |
CGCAGAG | 5640 | 0.0 | 37.238575 | 8 |
GTACATG | 4655 | 0.0 | 32.19082 | 1 |
GTGGTAT | 1225 | 0.0 | 30.878181 | 1 |
GCAGAGT | 6855 | 0.0 | 30.110054 | 9 |
TACATGG | 4905 | 0.0 | 28.791862 | 2 |
ACATGGG | 4985 | 0.0 | 27.167559 | 3 |
GTACGGA | 205 | 1.3017809E-5 | 24.72967 | 6 |
TGGTATC | 1380 | 0.0 | 24.14087 | 2 |
CAGAGTA | 6230 | 0.0 | 22.435896 | 9 |
CGTGTCG | 200 | 3.1269368E-4 | 21.726782 | 145 |
GAGTACA | 3830 | 0.0 | 21.651628 | 1 |
TCTGTCG | 650 | 0.0 | 21.169685 | 8 |