Basic Statistics
Measure | Value |
---|---|
Filename | DRR028529_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1963557 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2380 | 0.0 | 68.147446 | 1 |
GTATCAA | 4090 | 0.0 | 53.34818 | 1 |
TCAACGC | 4210 | 0.0 | 50.404293 | 4 |
ATCAACG | 4235 | 0.0 | 49.935734 | 3 |
CAACGCA | 4440 | 0.0 | 47.95638 | 5 |
CCTAGCG | 80 | 3.759216E-5 | 45.264946 | 3 |
AACGCAG | 4810 | 0.0 | 44.41799 | 6 |
TATCAAC | 4975 | 0.0 | 43.527134 | 2 |
ACGCAGA | 5315 | 0.0 | 39.380077 | 7 |
CGCAGAG | 5375 | 0.0 | 38.53626 | 8 |
GTACATG | 4230 | 0.0 | 33.184753 | 1 |
GCAGAGT | 6385 | 0.0 | 31.646471 | 9 |
TACATGG | 4420 | 0.0 | 28.510773 | 2 |
ACATGGG | 4590 | 0.0 | 26.034739 | 3 |
GTGGTAT | 1370 | 0.0 | 24.420746 | 1 |
GAGTACA | 3970 | 0.0 | 22.717096 | 1 |
TGGTATC | 1445 | 0.0 | 21.551754 | 2 |
AGTACAT | 3750 | 0.0 | 21.437479 | 2 |
CATGGGG | 3310 | 0.0 | 20.348711 | 4 |
GTCTAGC | 540 | 3.6379788E-12 | 20.203154 | 1 |