Basic Statistics
Measure | Value |
---|---|
Filename | DRR028519_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1980343 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1560 | 0.0 | 47.681053 | 1 |
TCAACGC | 2070 | 0.0 | 45.797657 | 4 |
ATCAACG | 2105 | 0.0 | 45.03617 | 3 |
GTATCAA | 2485 | 0.0 | 39.61664 | 1 |
CAACGCA | 2535 | 0.0 | 37.394985 | 5 |
GTACATG | 4415 | 0.0 | 35.84258 | 1 |
AACGCAG | 2705 | 0.0 | 35.04394 | 6 |
TATCAAC | 2970 | 0.0 | 32.410652 | 2 |
TACATGG | 4665 | 0.0 | 32.358543 | 2 |
ACGCAGA | 2975 | 0.0 | 31.372469 | 7 |
CGCAGAG | 3030 | 0.0 | 30.319372 | 8 |
ACATGGG | 5040 | 0.0 | 28.6487 | 3 |
CATGGGA | 2300 | 0.0 | 24.096613 | 4 |
GCAGAGT | 3995 | 0.0 | 20.809341 | 3 |
AGAGTAC | 3360 | 0.0 | 20.617325 | 5 |
CTAGCGT | 180 | 0.0041655162 | 20.256657 | 3 |
GAGCGAC | 1040 | 0.0 | 20.028442 | 145 |
GAGTACA | 3940 | 0.0 | 19.804224 | 1 |
TCTCGGG | 3280 | 0.0 | 19.708393 | 145 |
CAGAGTA | 3705 | 0.0 | 19.68258 | 4 |