DRR028416_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	DRR028416_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	90718
Sequences flagged as poor quality	0
Sequence length	151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	321	0.35384377962477126	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	233	0.25683987742234177	No Hit
GGGTAATAATGACTTGTTGGTTGATTGTAGATATTGGGCTGTTAATTGTC	127	0.13999426795123351	No Hit
GTGTTGGGTTGACAGTGAGGGTAATAATGACTTGTTGGTTGATTGTAGAT	114	0.1256641460349655	No Hit
GAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	101	0.11133402411869751	No Hit
CCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACATTCTCCTC	100	0.11023170704821536	No Hit
CTCATGAGCTGTCCCCACATTAGGCTTAAAAACAGATGCAATTCCCGGAC	99	0.1091293899777332	No Hit
GGGTAAATACGGGCCCTATTTCAAAGATTTTTAGGGGAATTAATTCTAGG	97	0.10692475583676889	No Hit
CCCATAGTAGGCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCTCA	96	0.10582243876628673	No Hit
CTCTACAAGGTTTTTTCCTAGTGTCCAAAGAGCTGTTCCTCTTTGGACTA	92	0.10141317048435812	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGT	10	0.0070905336	144.92966	9
GGTATCA	115	0.0	107.12191	1
TACATGA	30	1.5953892E-5	96.61976	2
TACTAGA	45	1.2273231E-6	80.516464	1
GCAGAGG	60	7.975723E-8	72.46482	9
TAACCGT	30	0.001937998	72.42469	7
TATAGTG	50	2.3034463E-6	72.42469	5
GTATCAA	235	0.0	64.75579	1
GAAGTGT	45	1.1941333E-4	64.37751	6
AACCGTG	35	0.0035706782	62.078312	8
GAATAAG	35	0.0035706782	62.078312	6
ATACCTT	60	6.797507E-6	60.35391	6
CTATAGT	50	2.0107244E-4	57.939754	4
ATCAACG	285	0.0	55.90678	3
TGGGAAC	40	0.006057999	54.318527	8
TCAACGC	295	0.0	54.011635	4
CAACGCA	315	0.0	50.582325	5
GTCTAAT	60	4.9328385E-4	48.30988	1
TCTAATC	45	0.00962941	48.30988	2
ACCGTGC	45	0.00962941	48.30988	9