Basic Statistics
Measure | Value |
---|---|
Filename | DRR028317_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 990639 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 1785 | 0.0 | 50.757423 | 1 |
GGTATCA | 1110 | 0.0 | 48.974056 | 1 |
ATCAACG | 1770 | 0.0 | 48.321068 | 3 |
TCAACGC | 1770 | 0.0 | 48.321068 | 4 |
CGATACC | 405 | 0.0 | 44.74173 | 145 |
CAACGCA | 1995 | 0.0 | 42.871323 | 5 |
AACGCAG | 2115 | 0.0 | 40.781612 | 6 |
TATCAAC | 2275 | 0.0 | 38.86925 | 2 |
GTACATG | 3785 | 0.0 | 37.916397 | 1 |
ACGCAGA | 2295 | 0.0 | 36.951405 | 7 |
TACATGG | 3930 | 0.0 | 35.77972 | 2 |
GTCGTAC | 125 | 1.2672766E-5 | 34.79117 | 1 |
CGCAGAG | 2515 | 0.0 | 33.719074 | 8 |
ACATGGG | 4220 | 0.0 | 32.633896 | 3 |
CATGGGG | 3200 | 0.0 | 27.1806 | 4 |
GCAGAGT | 2975 | 0.0 | 27.043556 | 9 |
GTTCGGG | 215 | 6.138089E-7 | 26.9699 | 1 |
GAGTACA | 2605 | 0.0 | 24.763388 | 1 |
CGTCGTC | 265 | 1.3796853E-7 | 24.616394 | 145 |
AGTACAT | 2850 | 0.0 | 22.634605 | 2 |