Basic Statistics
Measure | Value |
---|---|
Filename | DRR028295_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1723818 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCAACGC | 2020 | 0.0 | 47.362617 | 4 |
CGACGAC | 600 | 0.0 | 45.90347 | 145 |
ATCAACG | 2220 | 0.0 | 43.4222 | 3 |
GTATCAA | 2515 | 0.0 | 41.499 | 1 |
CAACGCA | 2435 | 0.0 | 39.29055 | 5 |
AACGCAG | 2605 | 0.0 | 36.726486 | 6 |
GTACATG | 5595 | 0.0 | 36.660595 | 1 |
TACATGG | 5565 | 0.0 | 34.383644 | 2 |
GGTATCA | 1690 | 0.0 | 33.45192 | 1 |
TCTCGGG | 1550 | 0.0 | 33.20013 | 145 |
ACATGGG | 5535 | 0.0 | 32.998642 | 3 |
ATCTACC | 1440 | 0.0 | 31.709633 | 145 |
ACGCAGA | 2945 | 0.0 | 31.501976 | 7 |
GAGTACA | 4050 | 0.0 | 30.602314 | 1 |
CGCAGAG | 2975 | 0.0 | 30.2098 | 8 |
TATCAAC | 3525 | 0.0 | 27.963593 | 2 |
AGTACAT | 4635 | 0.0 | 25.332521 | 2 |
CATGGGG | 4005 | 0.0 | 24.431177 | 4 |
GCAGAGT | 4115 | 0.0 | 22.016756 | 9 |
CGATCTC | 620 | 0.0 | 21.042336 | 145 |