Basic Statistics
Measure | Value |
---|---|
Filename | DRR028285_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1252814 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGATACC | 505 | 0.0 | 66.02789 | 145 |
ATCAACG | 1940 | 0.0 | 46.705635 | 3 |
TCAACGC | 1940 | 0.0 | 46.705635 | 4 |
GTATCAA | 2125 | 0.0 | 44.686195 | 1 |
GGTATCA | 1380 | 0.0 | 43.072075 | 1 |
CAACGCA | 2360 | 0.0 | 38.393616 | 5 |
TATCAAC | 2570 | 0.0 | 36.384598 | 2 |
AACGCAG | 2550 | 0.0 | 35.532913 | 6 |
GTACATG | 4615 | 0.0 | 34.712154 | 1 |
CGACGAA | 320 | 0.0 | 33.97835 | 145 |
ACGCAGA | 2775 | 0.0 | 32.390656 | 7 |
TACATGG | 4760 | 0.0 | 32.28419 | 2 |
CGCAGAG | 2815 | 0.0 | 31.930395 | 8 |
ACATGGG | 4745 | 0.0 | 30.553064 | 3 |
TCGCGTG | 95 | 0.0047318493 | 30.520903 | 7 |
GAGTACA | 3260 | 0.0 | 28.461212 | 1 |
GTATACG | 165 | 8.430398E-5 | 26.358963 | 1 |
CATGGGG | 3355 | 0.0 | 25.710793 | 4 |
GCAGAGT | 3515 | 0.0 | 25.159124 | 9 |
AGTACAT | 3850 | 0.0 | 22.781675 | 2 |