Basic Statistics
Measure | Value |
---|---|
Filename | DRR028268_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 906535 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1130 | 0.0 | 52.59989 | 1 |
GTATCAA | 1610 | 0.0 | 45.922314 | 1 |
TCAACGC | 1575 | 0.0 | 43.26102 | 4 |
ATCAACG | 1625 | 0.0 | 42.822037 | 3 |
CAACGCA | 1720 | 0.0 | 40.03544 | 5 |
AACGCAG | 1910 | 0.0 | 36.052856 | 6 |
GTACATG | 3450 | 0.0 | 34.666843 | 1 |
TATCAAC | 2135 | 0.0 | 32.592884 | 2 |
ACGCAGA | 2135 | 0.0 | 32.592884 | 7 |
TACATGG | 3620 | 0.0 | 31.43696 | 2 |
CGCAGAG | 2210 | 0.0 | 31.158804 | 8 |
ACATGGG | 3580 | 0.0 | 30.97832 | 3 |
GTCTACG | 120 | 4.0625993E-4 | 30.202175 | 1 |
GAGTACA | 2625 | 0.0 | 29.270222 | 1 |
TACCTGG | 1060 | 0.0 | 28.036734 | 2 |
GCAGAGT | 2600 | 0.0 | 25.927404 | 9 |
CATGGGG | 2615 | 0.0 | 24.947111 | 4 |
AGTACAT | 2915 | 0.0 | 24.368958 | 2 |
TACCGTC | 150 | 0.0014959408 | 24.16174 | 7 |
GTCCTAG | 430 | 3.6379788E-12 | 23.599838 | 1 |