Basic Statistics
Measure | Value |
---|---|
Filename | DRR028266_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1154497 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 1825 | 0.0 | 52.03037 | 1 |
TCAACGC | 1775 | 0.0 | 51.045815 | 4 |
ATCAACG | 1830 | 0.0 | 49.907745 | 3 |
GGTATCA | 1200 | 0.0 | 47.11529 | 1 |
CAACGCA | 2230 | 0.0 | 40.630634 | 5 |
TATCAAC | 2305 | 0.0 | 40.252007 | 2 |
GACGACC | 650 | 0.0 | 40.14557 | 145 |
AACGCAG | 2405 | 0.0 | 36.769966 | 6 |
GTACATG | 3820 | 0.0 | 35.104023 | 1 |
ACGCAGA | 2580 | 0.0 | 32.87113 | 7 |
TACATGG | 4005 | 0.0 | 32.75854 | 2 |
CGCAGAG | 2605 | 0.0 | 32.55567 | 8 |
ACATGGG | 4250 | 0.0 | 29.505684 | 3 |
GAGTACA | 3205 | 0.0 | 28.044142 | 1 |
GCAGAGT | 3035 | 0.0 | 26.749016 | 9 |
AGTACAT | 3165 | 0.0 | 26.566404 | 2 |
TGTACCG | 175 | 1.2576488E-4 | 24.852018 | 5 |
CATGGGG | 3215 | 0.0 | 24.57503 | 4 |
TACACTG | 1280 | 0.0 | 23.21787 | 5 |
AGTCCGC | 250 | 2.283814E-6 | 23.195219 | 145 |