Basic Statistics
Measure | Value |
---|---|
Filename | DRR028259_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 906420 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 1390 | 0.0 | 50.579857 | 1 |
TCAACGC | 1340 | 0.0 | 47.05818 | 4 |
ATCAACG | 1385 | 0.0 | 46.05254 | 3 |
GGTATCA | 910 | 0.0 | 45.399822 | 1 |
CAACGCA | 1575 | 0.0 | 40.0368 | 5 |
GTACGAC | 75 | 0.0014852834 | 38.656223 | 3 |
AACGCAG | 1750 | 0.0 | 37.275642 | 6 |
TATCAAC | 1825 | 0.0 | 36.14092 | 2 |
ACGCAGA | 1870 | 0.0 | 33.33324 | 7 |
GTACATG | 3020 | 0.0 | 31.920183 | 1 |
CGCAGAG | 1965 | 0.0 | 31.352854 | 8 |
TACATGG | 3200 | 0.0 | 28.765665 | 2 |
GAGCGAC | 340 | 3.6379788E-12 | 27.7131 | 145 |
GAGTACA | 2280 | 0.0 | 27.657001 | 1 |
ACATGGG | 3270 | 0.0 | 27.263277 | 3 |
TATAACG | 145 | 0.0012282876 | 24.993248 | 2 |
AGTACAT | 2495 | 0.0 | 24.111721 | 2 |
ATGGGCG | 215 | 1.8693905E-5 | 23.598276 | 5 |
GCAGAGT | 2520 | 0.0 | 23.584898 | 9 |
TGTACGA | 185 | 1.8338369E-4 | 23.507162 | 2 |