Basic Statistics
Measure | Value |
---|---|
Filename | DRR028239_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 964731 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1125 | 0.0 | 47.68313 | 1 |
GTATCAA | 1545 | 0.0 | 42.69711 | 1 |
CGACGAC | 270 | 0.0 | 40.272907 | 145 |
ATCAACG | 1525 | 0.0 | 39.9296 | 3 |
TCAACGC | 1555 | 0.0 | 39.159256 | 4 |
GTACATG | 3375 | 0.0 | 35.225372 | 1 |
CAACGCA | 1785 | 0.0 | 34.113525 | 5 |
TACATGG | 3475 | 0.0 | 32.960045 | 2 |
AACGCAG | 1910 | 0.0 | 31.880964 | 6 |
TATCAAC | 1965 | 0.0 | 31.726446 | 2 |
ACATGGG | 3630 | 0.0 | 30.55416 | 3 |
ACGCAGA | 2145 | 0.0 | 28.726133 | 7 |
GAGTACA | 2480 | 0.0 | 27.768822 | 1 |
CGCAGAG | 2250 | 0.0 | 27.38558 | 8 |
TAGATCG | 110 | 0.009677115 | 26.36045 | 5 |
ATACGGT | 140 | 0.0010001381 | 25.88973 | 6 |
ATCTACC | 855 | 0.0 | 25.435522 | 145 |
AGTACAT | 2615 | 0.0 | 24.394758 | 2 |
GCGAGTA | 150 | 0.0014952866 | 24.163748 | 9 |
CATGGGG | 2830 | 0.0 | 24.078363 | 4 |