DRR028171_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	DRR028171_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	457366
Sequences flagged as poor quality	0
Sequence length	151
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3720	0.8133529820756243	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3609	0.7890835785782065	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2654	0.5802792511905126	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	998	0.2182059882020089	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	917	0.20049588294713644	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	586	0.12812495900438597	No Hit
CTTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGT	548	0.11981651456382852	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	481	0.10516741515547723	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1725	0.0	88.316536	1
TGTACCG	65	1.3966019E-7	66.921364	5
GTATCAA	2890	0.0	60.74763	1
TCGTGCG	40	0.006049409	54.373604	9
CTCCGAC	295	0.0	51.620136	145
GTGGTAT	610	0.0	49.949516	1
TTCGGCG	45	0.009636794	48.332096	8
TATCAAC	3740	0.0	46.522873	2
TGGTATC	670	0.0	45.446594	2
ATCAACG	3770	0.0	45.383457	3
TCGTATC	80	3.727203E-5	45.321247	145
TCAACGC	3775	0.0	45.13129	4
CAACGCA	3895	0.0	43.740856	5
AACGCAG	4015	0.0	42.6141	6
GCGGTAT	70	0.0010527679	41.4547	1
AGACCGA	190	1.2914825E-10	38.16526	145
ACGCAGA	4625	0.0	36.993645	7
CGCAGAG	4715	0.0	36.13375	8
GCAGAGT	4990	0.0	33.561264	9
TATCTCG	110	2.4344599E-4	32.9537	5