Basic Statistics
Measure | Value |
---|---|
Filename | DRR028143_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2160018 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2840 | 0.0 | 69.53743 | 1 |
GTATCAA | 4680 | 0.0 | 52.59227 | 1 |
TCAACGC | 5235 | 0.0 | 46.116013 | 4 |
ATCAACG | 5285 | 0.0 | 45.8169 | 3 |
CAACGCA | 5555 | 0.0 | 43.459465 | 5 |
AACGCAG | 5955 | 0.0 | 40.662018 | 6 |
TATCAAC | 6115 | 0.0 | 39.955612 | 2 |
ACGCAGA | 6985 | 0.0 | 34.25088 | 7 |
GTACATG | 6745 | 0.0 | 33.692284 | 1 |
CGCAGAG | 7310 | 0.0 | 32.628925 | 8 |
TACATGG | 7125 | 0.0 | 31.239052 | 2 |
ACATGGG | 7260 | 0.0 | 29.358574 | 3 |
CTCCGAC | 800 | 0.0 | 28.098713 | 145 |
GCAGAGT | 8525 | 0.0 | 27.8085 | 9 |
TCGTATC | 345 | 3.6379788E-12 | 27.323666 | 145 |
TATAACG | 190 | 7.159655E-6 | 26.710917 | 2 |
CATGGGG | 5670 | 0.0 | 25.955965 | 4 |
GAGTACA | 5235 | 0.0 | 24.132406 | 1 |
CAGAGTA | 8100 | 0.0 | 21.570301 | 9 |
TATACAG | 1500 | 0.0 | 20.782673 | 5 |