Basic Statistics
Measure | Value |
---|---|
Filename | DRR015467_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14422088 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 18284 | 0.12677775922598725 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 18510 | 0.0 | 51.15946 | 1 |
GTATCAA | 34640 | 0.0 | 41.104458 | 1 |
TCAACGC | 41210 | 0.0 | 33.95329 | 4 |
ATCAACG | 41600 | 0.0 | 33.656857 | 3 |
CAACGCA | 43570 | 0.0 | 32.135075 | 5 |
TATCAAC | 45225 | 0.0 | 31.130144 | 2 |
AACGCAG | 46770 | 0.0 | 30.10964 | 6 |
CGCAGAG | 52040 | 0.0 | 26.550156 | 8 |
ACGCAGA | 52620 | 0.0 | 26.476868 | 7 |
GTACATG | 47680 | 0.0 | 24.771034 | 1 |
TACATGG | 47660 | 0.0 | 23.925797 | 2 |
GCAGAGT | 58245 | 0.0 | 23.127186 | 9 |
ACATGGG | 49700 | 0.0 | 22.11058 | 3 |
CAGAGTA | 57500 | 0.0 | 18.98027 | 10-11 |
AGAGTAC | 54390 | 0.0 | 18.68129 | 10-11 |
GAGTACT | 31595 | 0.0 | 18.257324 | 12-13 |
CATGGGG | 27715 | 0.0 | 18.092812 | 4 |
GTGGTAT | 9175 | 0.0 | 17.971336 | 1 |
TCTGTCG | 3220 | 0.0 | 17.37836 | 8 |
GTACTTT | 33195 | 0.0 | 16.979742 | 14-15 |