Basic Statistics
Measure | Value |
---|---|
Filename | DRR015461_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13419373 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 15294 | 0.11396955729600779 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 16515 | 0.0 | 45.323418 | 1 |
GTATCAA | 32035 | 0.0 | 42.632927 | 1 |
ATCAACG | 40065 | 0.0 | 33.255825 | 3 |
TCAACGC | 40200 | 0.0 | 33.10364 | 4 |
CAACGCA | 41855 | 0.0 | 31.839209 | 5 |
TATCAAC | 43190 | 0.0 | 31.134144 | 2 |
AACGCAG | 43860 | 0.0 | 30.40549 | 6 |
ACGCAGA | 51330 | 0.0 | 25.635008 | 7 |
CGCAGAG | 51535 | 0.0 | 25.323126 | 8 |
GTACATG | 44140 | 0.0 | 24.465878 | 1 |
TACATGG | 44860 | 0.0 | 23.080433 | 2 |
GCAGAGT | 57400 | 0.0 | 22.045986 | 9 |
ACATGGG | 46850 | 0.0 | 21.419628 | 3 |
AGAGTAC | 51620 | 0.0 | 19.701384 | 10-11 |
AGTACTT | 30155 | 0.0 | 18.054712 | 12-13 |
GAGTACT | 28575 | 0.0 | 17.866678 | 12-13 |
CAGAGTA | 55360 | 0.0 | 17.293657 | 10-11 |
CATGGGG | 27350 | 0.0 | 17.240635 | 4 |
GTACTTT | 30695 | 0.0 | 16.358318 | 14-15 |
CATGGGT | 11510 | 0.0 | 15.6347885 | 4 |