Basic Statistics
Measure | Value |
---|---|
Filename | DRR015453_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9066061 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 14382 | 0.15863559709117334 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 9998 | 0.11027942565133854 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 11555 | 0.0 | 48.009335 | 1 |
GTATCAA | 22650 | 0.0 | 43.32457 | 1 |
TACCTGG | 8850 | 0.0 | 35.18293 | 2 |
ATCAACG | 29485 | 0.0 | 32.716675 | 3 |
TCAACGC | 29735 | 0.0 | 32.400085 | 4 |
CAACGCA | 30655 | 0.0 | 31.486115 | 5 |
GTACCTG | 10110 | 0.0 | 31.406546 | 1 |
TATAACG | 825 | 0.0 | 30.94487 | 2 |
TATCAAC | 32195 | 0.0 | 30.245964 | 2 |
AACGCAG | 32920 | 0.0 | 29.499475 | 6 |
ACCTGGG | 10780 | 0.0 | 27.86899 | 3 |
ACGCAGA | 38290 | 0.0 | 25.172844 | 7 |
GTACATG | 31855 | 0.0 | 25.005104 | 1 |
CGCAGAG | 38445 | 0.0 | 24.885117 | 8 |
TACATGG | 32190 | 0.0 | 23.721844 | 2 |
ACATGGG | 32535 | 0.0 | 22.447412 | 3 |
GCAGAGT | 42075 | 0.0 | 22.20811 | 9 |
ATAACGC | 1420 | 0.0 | 20.546896 | 3 |
AGAGTAC | 39055 | 0.0 | 20.440887 | 10-11 |
GTACACG | 890 | 0.0 | 19.991098 | 1 |