Basic Statistics
Measure | Value |
---|---|
Filename | DRR015414_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9236094 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 28085 | 0.3040787588346329 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 22406 | 0.2425917276285841 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 10756 | 0.11645615559997549 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 20545 | 0.0 | 44.419624 | 1 |
GTATCAA | 35395 | 0.0 | 37.38969 | 1 |
TCAACGC | 40945 | 0.0 | 31.842804 | 4 |
ATCAACG | 41025 | 0.0 | 31.747269 | 3 |
CAACGCA | 42230 | 0.0 | 30.852325 | 5 |
TATCAAC | 42810 | 0.0 | 30.614817 | 2 |
AACGCAG | 43730 | 0.0 | 29.8659 | 6 |
ACGCAGA | 48715 | 0.0 | 26.417524 | 7 |
CGCAGAG | 48605 | 0.0 | 26.139812 | 8 |
TATAACG | 840 | 0.0 | 24.912205 | 2 |
GCAGAGT | 51115 | 0.0 | 23.859346 | 9 |
GTACATG | 27110 | 0.0 | 23.074018 | 1 |
TACATGG | 27585 | 0.0 | 21.768805 | 2 |
GAGTACT | 29335 | 0.0 | 21.717188 | 12-13 |
AGAGTAC | 42545 | 0.0 | 20.175982 | 10-11 |
ACATGGG | 28655 | 0.0 | 20.035149 | 3 |
CAGAGTA | 49630 | 0.0 | 19.692568 | 10-11 |
ATAACGC | 1065 | 0.0 | 19.649063 | 3 |
GTACTTT | 32380 | 0.0 | 19.562315 | 14-15 |
TAACGCA | 1095 | 0.0 | 18.695383 | 4 |