Basic Statistics
Measure | Value |
---|---|
Filename | DRR015391_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10193149 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 40295 | 0.395314539206677 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 33297 | 0.32666058349583627 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 18044 | 0.17702085979514282 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 19400 | 0.0 | 57.494987 | 1 |
GTATCAA | 36295 | 0.0 | 41.80297 | 1 |
ATCAACG | 44660 | 0.0 | 33.57405 | 3 |
TCAACGC | 44855 | 0.0 | 33.478 | 4 |
TATCAAC | 46415 | 0.0 | 32.345387 | 2 |
CAACGCA | 46430 | 0.0 | 32.322758 | 5 |
AACGCAG | 47910 | 0.0 | 31.405739 | 6 |
GTGGTAT | 7240 | 0.0 | 28.536827 | 1 |
ACGCAGA | 53565 | 0.0 | 27.622974 | 7 |
CGCAGAG | 54020 | 0.0 | 27.16077 | 8 |
TGGTATC | 7650 | 0.0 | 25.936623 | 2 |
GCAGAGT | 57525 | 0.0 | 24.697954 | 9 |
GTACATG | 31155 | 0.0 | 23.721746 | 1 |
TATAACG | 990 | 0.0 | 23.44355 | 2 |
TACATGG | 31030 | 0.0 | 22.424055 | 2 |
GAGTACT | 38890 | 0.0 | 21.67056 | 12-13 |
CAGAGTA | 55615 | 0.0 | 21.325489 | 10-11 |
ACATGGG | 32170 | 0.0 | 20.93523 | 3 |
AGAGTAC | 52515 | 0.0 | 20.622187 | 10-11 |
GTACTTT | 41780 | 0.0 | 19.888458 | 14-15 |