Basic Statistics
Measure | Value |
---|---|
Filename | DRR015386_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8570016 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 34213 | 0.39921745770369627 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 24205 | 0.2824382124840841 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 19928 | 0.2325316545500032 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 13070 | 0.0 | 54.92648 | 1 |
GTATCAA | 27245 | 0.0 | 44.7739 | 1 |
ATCAACG | 36045 | 0.0 | 33.612087 | 3 |
TCAACGC | 36130 | 0.0 | 33.48261 | 4 |
CAACGCA | 37020 | 0.0 | 32.60283 | 5 |
TATCAAC | 37585 | 0.0 | 32.392357 | 2 |
AACGCAG | 38580 | 0.0 | 31.448935 | 6 |
ACGCAGA | 44665 | 0.0 | 26.807198 | 7 |
CGCAGAG | 44840 | 0.0 | 26.3778 | 8 |
GCAGAGT | 47495 | 0.0 | 24.153906 | 9 |
GTGGTAT | 5435 | 0.0 | 23.131866 | 1 |
TGGTATC | 5525 | 0.0 | 22.249853 | 2 |
AGAGTAC | 44090 | 0.0 | 22.179855 | 10-11 |
GTACATG | 19790 | 0.0 | 21.337086 | 1 |
AGTACTT | 36925 | 0.0 | 20.808182 | 12-13 |
TACATGG | 19565 | 0.0 | 20.501787 | 2 |
TATAACG | 700 | 0.0 | 20.163195 | 2 |
GAGTACT | 35420 | 0.0 | 19.53401 | 12-13 |
CAGAGTA | 46665 | 0.0 | 18.991035 | 10-11 |
ACATGGG | 20500 | 0.0 | 18.389595 | 3 |