Basic Statistics
Measure | Value |
---|---|
Filename | DRR015376_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10685807 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 38338 | 0.35877496196590486 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 28874 | 0.27020888548707644 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 19792 | 0.1852176443014552 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 20020 | 0.0 | 54.005215 | 1 |
GTATCAA | 39070 | 0.0 | 42.86397 | 1 |
ATCAACG | 49560 | 0.0 | 33.536057 | 3 |
TCAACGC | 50195 | 0.0 | 33.03929 | 4 |
TATCAAC | 52020 | 0.0 | 31.976393 | 2 |
CAACGCA | 52100 | 0.0 | 31.813766 | 5 |
AACGCAG | 53605 | 0.0 | 30.937544 | 6 |
GTACATG | 43380 | 0.0 | 27.626251 | 1 |
TACATGG | 43335 | 0.0 | 26.919863 | 2 |
ACGCAGA | 60995 | 0.0 | 26.823725 | 7 |
CGCAGAG | 61205 | 0.0 | 26.620184 | 8 |
ACATGGG | 44845 | 0.0 | 24.968428 | 3 |
GCAGAGT | 65470 | 0.0 | 24.330414 | 9 |
CATGGGT | 15765 | 0.0 | 24.271446 | 4 |
GTGGTAT | 9000 | 0.0 | 21.44121 | 1 |
AGAGTAC | 59790 | 0.0 | 20.805094 | 10-11 |
GAGTACT | 40740 | 0.0 | 20.62745 | 12-13 |
CAGAGTA | 63610 | 0.0 | 20.149357 | 10-11 |
TGGTATC | 9010 | 0.0 | 20.097958 | 2 |
AGTACTT | 41730 | 0.0 | 20.018154 | 12-13 |