Basic Statistics
Measure | Value |
---|---|
Filename | DRR015363_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14867354 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 34827 | 0.23425150164582076 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 26923 | 0.18108804027939335 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 15603 | 0.10494806271512738 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 20820 | 0.0 | 53.18548 | 1 |
GTATCAA | 40185 | 0.0 | 41.610874 | 1 |
ATCAACG | 46985 | 0.0 | 34.979614 | 3 |
TCAACGC | 47030 | 0.0 | 34.907444 | 4 |
CAACGCA | 49555 | 0.0 | 33.119606 | 5 |
AACGCAG | 51030 | 0.0 | 32.242546 | 6 |
TATCAAC | 51500 | 0.0 | 32.142776 | 2 |
ACGCAGA | 57300 | 0.0 | 28.357094 | 7 |
CGCAGAG | 57640 | 0.0 | 28.023952 | 8 |
GTACATG | 43265 | 0.0 | 27.6242 | 1 |
TACATGG | 43165 | 0.0 | 26.237417 | 2 |
ACATGGG | 43715 | 0.0 | 24.980852 | 3 |
GCAGAGT | 63550 | 0.0 | 24.799536 | 9 |
CAGAGTA | 62575 | 0.0 | 20.408981 | 10-11 |
GTGGTAT | 9205 | 0.0 | 20.271774 | 1 |
AGAGTAC | 58600 | 0.0 | 20.217297 | 10-11 |
CATGGGG | 25480 | 0.0 | 19.80426 | 4 |
GAGTACT | 42990 | 0.0 | 19.67389 | 12-13 |
CATGGGT | 12250 | 0.0 | 19.53782 | 4 |
GAGTACA | 31665 | 0.0 | 18.92945 | 1 |