Basic Statistics
Measure | Value |
---|---|
Filename | DRR015363_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14867354 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 36416 | 0.24493934831981537 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 26180 | 0.1760905134834349 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 18644 | 0.12540227400248896 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 19560 | 0.0 | 54.023388 | 1 |
GTATCAA | 40090 | 0.0 | 45.01473 | 1 |
ATCAACG | 49490 | 0.0 | 35.778065 | 3 |
TCAACGC | 49670 | 0.0 | 35.66673 | 4 |
CAACGCA | 51675 | 0.0 | 34.238834 | 5 |
AACGCAG | 53250 | 0.0 | 33.294483 | 6 |
TATCAAC | 53560 | 0.0 | 33.28865 | 2 |
ACGCAGA | 60405 | 0.0 | 29.04194 | 7 |
CGCAGAG | 60740 | 0.0 | 28.716984 | 8 |
GTACATG | 38590 | 0.0 | 27.559948 | 1 |
TACATGG | 39045 | 0.0 | 25.87883 | 2 |
GCAGAGT | 67265 | 0.0 | 25.454613 | 9 |
ACATGGG | 39645 | 0.0 | 24.523228 | 3 |
AGAGTAC | 62180 | 0.0 | 21.722206 | 10-11 |
CAGAGTA | 65840 | 0.0 | 19.96173 | 10-11 |
GAGTACT | 47065 | 0.0 | 19.798086 | 12-13 |
AGTACTT | 49245 | 0.0 | 19.665583 | 12-13 |
CATGGGG | 23195 | 0.0 | 19.65327 | 4 |
GTGGTAT | 8760 | 0.0 | 18.481997 | 1 |
GTACTTT | 50795 | 0.0 | 18.044127 | 14-15 |