Basic Statistics
Measure | Value |
---|---|
Filename | DRR015358_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11400678 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 29384 | 0.25773905727361124 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 22310 | 0.19569011597380437 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 14033 | 0.12308917066160452 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 15810 | 0.0 | 55.04048 | 1 |
GTATCAA | 31210 | 0.0 | 43.1205 | 1 |
ATCAACG | 38025 | 0.0 | 34.79769 | 3 |
TCAACGC | 38150 | 0.0 | 34.65982 | 4 |
CAACGCA | 40305 | 0.0 | 32.772785 | 5 |
TATCAAC | 41280 | 0.0 | 32.197407 | 2 |
AACGCAG | 41750 | 0.0 | 31.769 | 6 |
GTACATG | 39225 | 0.0 | 29.772816 | 1 |
TACATGG | 38920 | 0.0 | 28.806927 | 2 |
ACGCAGA | 47380 | 0.0 | 27.677328 | 7 |
CGCAGAG | 47440 | 0.0 | 27.469557 | 8 |
ACATGGG | 39875 | 0.0 | 27.124 | 3 |
GCAGAGT | 52030 | 0.0 | 24.467016 | 9 |
CATGGGT | 12510 | 0.0 | 24.114677 | 4 |
CATGGGG | 21815 | 0.0 | 22.005056 | 4 |
GAGTACA | 27710 | 0.0 | 20.711176 | 1 |
AGAGTAC | 47710 | 0.0 | 20.56016 | 10-11 |
CAGAGTA | 50875 | 0.0 | 20.00994 | 10-11 |
GAGTACT | 33815 | 0.0 | 19.912952 | 12-13 |
ATAACGC | 1290 | 0.0 | 19.04712 | 3 |